Populasi Bakteri, Fungi, dan Biomassa Karbon Mikroba pada Agroforestri dan Monokultur Kakao

Authors

  • Zulkaidhah Zulkaidhah Universitas Tadulako

DOI:

https://doi.org/10.55606/jurrimipa.v4i2.9966

Keywords:

Agroforestry Complexity, Cocoa Monoculture, Microbial Biomass Carbon, Soil Bacteria, Soil Fungi

Abstract

Land-use simplification may alter soil biological quality by reducing vegetation diversity, organic matter inputs, and habitat availability for soil microorganisms. This study aimed to analyze soil bacterial populations, fungal populations, and microbial biomass carbon under complex agroforestry, simple agroforestry, and cocoa monoculture systems around Lore Lindu National Park, Central Sulawesi. Soil samples were systematically collected from five sampling points within each land-use system at a depth of 0–20 cm. Culturable bacterial and fungal populations were determined using serial dilution and total plate count methods, while microbial biomass carbon was measured using chloroform fumigation extraction. Data were analyzed using one-way analysis of variance followed by the Least Significant Difference test at the 5% significance level. Land-use type significantly affected all measured biological parameters. Complex agroforestry produced the highest bacterial population, fungal population, and microbial biomass carbon, reaching 9.08 × 10⁸ CFU g⁻¹, 6.84 × 10⁵ CFU g⁻¹, and 822.80 mg C kg⁻¹, respectively. Simple agroforestry showed intermediate values, whereas cocoa monoculture produced the lowest values. These findings demonstrate that greater vegetation complexity supports soil microbial abundance and biomass by providing diverse organic substrates and more stable microenvironmental conditions. Maintaining shade-tree diversity in cocoa agroforestry is therefore important for conserving soil biological quality in the buffer zone of Lore Lindu National Park.

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References

Agbangba, C. E., Sacla Aide, E., Honfo, H., & Glèlè Kakai, R. (2024). On the use of post-hoc tests in environmental and biological sciences: A critical review. Heliyon, 10, e25131. https://doi.org/10.1016/j.heliyon.2024.e25131

Baldrian, P., López-Mondéjar, R., & Kohout, P. (2023). Forest microbiome and global change. Nature Reviews Microbiology, 21, 487–501. https://doi.org/10.1038/s41579-023-00876-4

Banerjee, S., Baah-Acheamfour, M., Carlyle, C. N., Bissett, A., Richardson, A. E., Siddique, T., & Chang, S. X. (2016). Determinants of bacterial communities in Canadian agroforestry systems. Environmental Microbiology, 18(6), 1807–1820. https://doi.org/10.1111/1462-2920.12986

Ben-David, A., & Davidson, C. E. (2014). Estimation method for serial dilution experiments. Journal of Microbiological Methods, 107, 214–221. https://doi.org/10.1016/j.mimet.2014.08.023

Bender, S. F., Wagg, C., & van der Heijden, M. G. A. (2016). An underground revolution: Biodiversity and soil ecological engineering for agricultural sustainability. Trends in Ecology & Evolution, 31, 440–452. https://doi.org/10.1016/j.tree.2016.02.016

Berkelmann, D., Schneider, D., Engelhaupt, M., Heinemann, M., Christel, S., Wijayanti, M., & Daniel, R. (2018). How rainforest conversion to agricultural systems in Sumatra (Indonesia) affects active soil bacterial communities. Frontiers in Microbiology, 9, 2381. https://doi.org/10.3389/fmicb.2018.02381

Beule, L., Corre, M. D., Schmidt, M., Göbel, L., Veldkamp, E., & Karlovsky, P. (2019). Conversion of monoculture cropland and open grassland to agroforestry alters the abundance of soil bacteria, fungi and soil-N-cycling genes. PLoS ONE, 14(6), e0218779. https://doi.org/10.1371/journal.pone.0218779

Butler, O. M., Manzoni, S., & Warren, C. R. (2023). Community composition and physiological plasticity control microbial carbon storage across natural and experimental soil fertility gradients. The ISME Journal, 17(12), 2157–2168. https://doi.org/10.1038/s41396-023-01527-5

Cardinael, R., Chevallier, T., Cambou, A., Béral, C., Barthès, B. G., Dupraz, C., & Chenu, C. (2017). Increased soil organic carbon stocks under agroforestry: A survey of six different sites in France. Agriculture, Ecosystems & Environment, 236, 243–255. https://doi.org/10.1016/j.agee.2016.12.011

Das, S., Deb, S., Sahoo, S. S., & Sahoo, U. K. (2023). Soil microbial biomass carbon stock and its relation with climatic and other environmental factors in forest ecosystems: A review. Acta Ecologica Sinica, 43, 1–11. https://doi.org/10.1016/j.chnaes.2022.12.007

Dodino-Gutiérrez, C. A., Santiago-Galvis, J. M., Rabelo-Florez, R. A., & Cubillos-Hinojosa, J. G. (2023). Application of molecular techniques in soil microbiology for the identification of bacteria with agricultural potential: A review and bibliometric analysis. Revista Colombiana de Ciencias Hortícolas, 17(2). https://doi.org/10.17584/rcch.2023v17i2.16096

Eddy, W. C., & Yang, W. H. (2022). Improvements in soil health and soil carbon sequestration by an agroforestry for food production system. Agriculture, Ecosystems & Environment, 333, 107945. https://doi.org/10.1016/j.agee.2022.107945

Guo, J., Wang, G., Wu, Y., Shi, Y., Feng, Y., & Cao, F. (2019). Ginkgo agroforestry practices alter the fungal community structures at different soil depths in Eastern China. Environmental Science and Pollution Research, 26(21), 21534–21543. https://doi.org/10.1007/s11356-019-05293-w

Hapid, A., & Zulkaidhah. (2019). Keanekaragaman jenis rayap pada lahan agroforestri dan kebun kemiri di Desa Bakubakulu Kecamatan Palolo Kabupaten Sigi. Biocelebes, 13(2).

Harahap, Y. F. (2019). Analisis kehilangan karbon organik tanah pada Daerah Aliran Sungai Deli (DAS Deli) Provinsi Sumatera Utara. Tunas Geografi, 8(1). https://doi.org/10.24114/tgeo.v8i1.13481

Jose, S. (2009). Agroforestry for ecosystem services and environmental benefits: An overview. Agroforestry Systems, 76, 1–10. https://doi.org/10.1007/s10457-009-9229-7

Kim, N., Zabaloy, M. C., Guan, K., & Villamil, M. B. (2020). Do cover crops benefit soil microbiome? A meta-analysis of current research. Soil Biology and Biochemistry, 142, 107701. https://doi.org/10.1016/j.soilbio.2019.107701

Lukita, S. Y., Rahayu, E., & Parwati, W. D. U. (2023). Pengaruh aplikasi cocopeat pada media tanam dan penyiraman air leri terhadap pertumbuhan bibit kelapa sawit (Elaeis guineensis Jacq) di pre nursery. AGROFORETECH, 1(1), 202–209.

Martini, K. M., Boddu, S. S., Nemenman, I., & Vega, N. M. (2024). Maximum likelihood estimators for colony-forming units. Microbiology Spectrum, 12(9). https://doi.org/10.1128/spectrum.03946-23

Mishra, A. K., Yadav, P., Sharma, S., & Maurya, P. (2024). Comparison of microbial diversity and community structure in soils managed with organic and chemical fertilization strategies using amplicon sequencing of 16S and ITS regions. Frontiers in Microbiology, 15, 1444903. https://doi.org/10.3389/fmicb.2024.1444903

Muhardi, & Effendy. (2017). Cocoa farming patterns for sustainability of Indonesia Lore Lindu National Park (LLNP). Australian Journal of Crop Science, 11(8). https://doi.org/10.21475/ajcs.17.11.08.pne34

Nahon, S. M. R., Trindade, F. C., Yoshiura, C. A., Martins, G. C., Costa, I. R. C. da, Costa, P. H. de O., & Valadares, R. B. da S. (2024). Impact of agroforestry practices on soil microbial diversity and nutrient cycling in Atlantic Rainforest cocoa systems. International Journal of Molecular Sciences, 25(21), 11345. https://doi.org/10.3390/ijms252111345

Radhakrishnan, S., & Mohan, V. (2016). Status of microbial diversity in agroforestry systems in Tamil Nadu, India. Journal of Basic Microbiology, 56(6), 651–660. https://doi.org/10.1002/jobm.201500639

Vance, E. D., Brookes, P. C., & Jenkinson, D. S. (1987). An extraction method for measuring soil microbial biomass C. Soil Biology and Biochemistry, 19(6), 703–707. https://doi.org/10.1016/0038-0717(87)90052-6

Wang, B., An, S., Liang, C., Liu, Y., & Kuzyakov, Y. (2021). Microbial necromass as the source of soil organic carbon in global ecosystems. Soil Biology and Biochemistry, 162, 108422. https://doi.org/10.1016/j.soilbio.2021.108422

Wang, C., & Kuzyakov, Y. (2024). Mechanisms and implications of bacterial-fungal competition for soil resources. The ISME Journal, 18(1), wrae073. https://doi.org/10.1093/ismejo/wrae073

Wu, B., Zhang, M., Zhai, Z., Dai, H., Yang, M., & Zhang, Y. (2024). Soil organic carbon, carbon fractions, and microbial community under various organic amendments. Scientific Reports, 14, 25431. https://doi.org/10.1038/s41598-024-75771-w

Zhang, Z. Y., Li, X., Chen, W. H., Liang, J. D., & Han, Y. F. (2023). Culturable fungi from urban soils in China II, with the description of 18 novel species in Ascomycota (Dothideomycetes, Eurotiomycetes, Leotiomycetes and Sordariomycetes). MycoKeys, 98, 1–39. https://doi.org/10.3897/mycokeys.98.102816

Zhou, J., Sun, T., Shi, L., Kurganova, I., Lopes de Gerenyu, V., Kalinina, O., & Kuzyakov, Y. (2023). Organic carbon accumulation and microbial activities in arable soils after abandonment: A chronosequence study. Geoderma, 435, 116496. https://doi.org/10.1016/j.geoderma.2023.116496

Zulkaidhah, Z., Malik, A., Hapid, A., Hamka, H., Ariyanti, A., & Rahman, N. (2021). The diversity of termite species on natural forest and agroforestry land in Sulawesi tropical forests in Indonesia. Annals of Silvicultural Research, 46(2). https://doi.org/10.12899/asr-2228

Zulkaidhah, Z., Wardah, W., Saleh, S., Satriawan, W., Hapid, A., Wulandari, R., & Hamka, H. (2022). Soil macrofauna diversity and litter decomposition rate in the buffer zone of Lore Lindu Biosphere Reserve Indonesia. International Journal of Design & Nature and Ecodynamics, 17(5). https://doi.org/10.18280/ijdne.170513

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Published

2025-08-31

How to Cite

Zulkaidhah Zulkaidhah. (2025). Populasi Bakteri, Fungi, dan Biomassa Karbon Mikroba pada Agroforestri dan Monokultur Kakao. JURNAL RISET RUMPUN MATEMATIKA DAN ILMU PENGETAHUAN ALAM, 4(2), 399–417. https://doi.org/10.55606/jurrimipa.v4i2.9966